Syed Sibte Raza Abidi

@inproceedings{wvw_swh_21,

title = {Towards Model-Driven Semantic Interfaces for Electronic Health Records on Multiple Platforms Using Notation3},

author = {William Van Woensel and Samina Abidi and Syed Sibte Raza Abidi},

url = {http://ceur-ws.org/Vol-3055/paper4.pdf},

year  = {2021},

date = {2021-10-24},

urldate = {2021-10-24},

booktitle = {4th International Workshop on Semantic Web Meets Health Data Management (SWH’21) co-located with 20th International Semantic Web Conference (ISWC’21)},

keywords = {Electronic Medical Record, Model-driven Engineering, Semantic Web},

pubstate = {published},

tppubtype = {inproceedings}

}

@inproceedings{wvw_aime_21,

title = {Semantic Web Framework to Computerize Staged Reflex Testing Protocols to Mitigate Underutilization of Pathology Tests for Diagnosing Pituitary Disorders},

author = {William Van Woensel and Manal Elnenaei and Syed Ali Imran and Syed Sibte Raza Abidi},

year  = {2021},

date = {2021-06-16},

urldate = {2021-06-16},

booktitle = {International Conference on Artificial Intelligence in Medicine (AIME)},

keywords = {Clinical Decision Support Systems, Reflex Protocols, Semantic Web},

pubstate = {published},

tppubtype = {inproceedings}

}

@inproceedings{VANWOENSEL2020-COCIG1,

title = {A CIG Integration Framework to Provide Decision Support for Comorbid Conditions using Transaction-based Semantics and Temporal Planning},

author = {William Van Woensel and Samina Abidi and Borna Jafarpour and Syed Sibte Raza Abidi},

year  = {2020},

date = {2020-08-01},

urldate = {2020-08-01},

booktitle = {International Conference on Artificial Intelligence in Medicine (AIME 2020)},

abstract = {Managing comorbid conditions, i.e., patients with multiple medical conditions, is quite challenging for Clinical Decision Support Systems (CDSS) based on computerized Clinical Practice Guidelines (CPG). In case of comorbidity, CDSS will need to recommend treatments from multiple different CPG, which may adversely interact (e.g., drug-disease interactions), or introduce inefficiencies. A-priori, static integration of computerized comorbid CPG is insufficient for clinical practice. In this paper, we present a solution for dynamic integration of CPG in response to evolving health profiles. Using Description and Transaction Logics, we define a set of CIG integration semantics for encoding integration decisions that cope with comorbidity issues at execution-time. These dynamic, transaction-based semantics are well-suited to roll back prior decisions when no longer safe or efficient; or, inversely, apply new decisions when relevant. Moreover, comorbid CIG integration should consider temporal properties of CIG tasks—at execution-time, these properties will be influenced by a range of temporal constraints. Given all temporal constraints, optimal task schedules will be calculated that will determine the feasibility of CIG integration decisions.},

keywords = {Clinical Decision Support Systems, Clinical Practice Guidelines, Comorbidities, Ontology, Semantic Web},

pubstate = {published},

tppubtype = {inproceedings}

}

@inproceedings{DBLP:conf/aiia/Mohammadhassanzadeh17,

title = {SeDAn: A Plausible Reasoning Approach for Semantics-based Data Analytics in Healthcare},

author = {Hossein Mohammadhassanzadeh and Samina Raza Abidi and Mohammad Salman Shah and Mehdi Karamollahi and Syed Sibte Raza Abidi},

url = {http://ceur-ws.org/Vol-1982/paper7.pdf},

year  = {2017},

date = {2017-11-14},

booktitle = {Workshop on Artificial Intelligence with Application in Health, 16th International Conference of the Italian Association for Artificial Intelligence},

address = {Bari, Italy},

keywords = {Health Data Analytics, Knowledge Management, Plausible reasoning, Semantic Web},

pubstate = {published},

tppubtype = {inproceedings}

}

@inproceedings{Rajabi2017,

title = {Discovering Central Practitioners in a Medical Discussion Forum Using Semantic Web Analytics },

author = {Enayat Rajabi and Syed Sibte Raza Abidi },

doi = {10.3233/978-1-61499-753-5-486},

issn = {1879-8365},

year  = {2017},

date = {2017-04-24},

booktitle = {Informatics for Health (MIE2017), Manchester, UK},

pages = {486-490},

publisher = {European Federation for Medical Informatics (EFMI) and IOS Press},

abstract = {The aim of this paper is to investigate semantic web based methods to

enrich and transform a medical discussion forum in order to perform semanticsdriven

social network analysis. We use the centrality measures as well as semantic

similarity metrics to identify the most influential practitioners within a discussion

forum. The centrality results of our approach are in line with centrality measures

produced by traditional SNA methods, thus validating the applicability of semantic

web based methods for SNA, particularly for analyzing social networks for

specialized discussion forums. },

keywords = {Semantic Web, Semantic Web Analytics, Social Network Analysis},

pubstate = {published},

tppubtype = {inproceedings}

}

@inproceedings{Mohammadhassanzadeh2016,

title = {A Semantic Web-based Approach to Plausible Reasoning for Improving Clinical Knowledge Engineering},

author = {Hossein Mohammadhassanzadeh and William Van Woensel and Samina Raza Abidi and Syed Sibte Raza Abidi},

year  = {2016},

date = {2016-02-24},

urldate = {2016-02-24},

booktitle = {IEEE International Conference on Biomedical and Health Informatics, Las Vegas},

abstract = {In this paper, we present a semantic web based knowledge engineering approach to extend the coverage of medical knowledge-based systems in order to solve complex medical queries that demand the integration of deterministic and plausible knowledge.  We leverage plausible reasoning mechanisms, which exploit associations between the underlying domain-specific data, as well as tentative domain knowledge, to extend the coverage of a medical knowledge base. We demonstrate that Semantic Web technologies, due to their efficient solutions for federated data management and built-in DL-based inferencing methods, offer useful opportunities to support plausible reasoning for medical decision support tasks. We evaluated our multi-strategy medical reasoning approach using real-world medical data. Our results illustrate that plausible reasoning improved the knowledge coverage of the original medical knowledge base by 10-12%, and in turn helped to solve complex disease diagnostic queries.},

keywords = {Clinical Decision Support Systems, Plausbile Reasoning, Semantic Web},

pubstate = {published},

tppubtype = {inproceedings}

}

@inproceedings{DBLP:conf/semweb/WoenselMAA15,

title = {Multi-Strategy Semantic Web Reasoning for Medical Knowledge Bases},

author = {William Van Woensel and Hossein Mohammadhassanzadeh and Samina Raza Abidi and Syed Sibte Raza Abidi},

url = {http://ceur-ws.org/Vol-1428/BDM2I_2015_paper_8.pdf},

year  = {2015},

date = {2015-10-11},

booktitle = {Proceedings of International Workshop on Biomedical Data Mining, Modeling, and Semantic Integration: A Promising Approach to Solving Unmet Medical Needs (BDM2I2015)},

keywords = {Health Informatics, Knowledge Based Systems, Ontology, Semantic Web},

pubstate = {published},

tppubtype = {inproceedings}

}

@inproceedings{DBLP:conf/bigdataconf/HaiderAWA14,

title = {Integrating Existing Large Scale Medical Laboratory Data into the Semantic Web Framework},

author = {Newres Al Haider and Samina Raza Abidi and William Van Woensel and Syed Sibte Raza Abidi},

url = {http://dx.doi.org/10.1109/BigData.2014.7004338},

year  = {2014},

date = {2014-01-01},

booktitle = {2014 IEEE International Conference on Big Data, Big Data 2014, Washington, DC, USA, October 27-30, 2014},

pages = {1040--1048},

crossref = {DBLP:conf/bigdataconf/2014},

keywords = {Health Data Analytics, Health Informatics, Semantic Web},

pubstate = {published},

tppubtype = {inproceedings}

}

@inproceedings{DBLP:conf/aime/JafarpourA13,

title = {Merging Disease-Specific Clinical Guidelines to Handle Comorbidities in a Clinical Decision Support Setting},

author = {Borna Jafarpour and Syed Sibte Raza Abidi},

url = {http://dx.doi.org/10.1007/978-3-642-38326-7_5},

year  = {2013},

date = {2013-01-01},

booktitle = {14th Conference on Artificial Intelligence in Medicine, AIME 2013, Murcia, Spain, May 29 - June 1, 2013. Proceedings},

pages = {28--32},

crossref = {DBLP:conf/aime/2013},

keywords = {Clinical Decision Support Systems, Clinical Pathways, Comorbidities, Health Informatics, Semantic Web},

pubstate = {published},

tppubtype = {inproceedings}

}

@inproceedings{DBLP:conf/medinfo/AbidiSSA13,

title = {Usability Evaluation of Family Physicians' Interaction with the Comorbidity Ontological Modeling and ExecuTion System (COMET)},

author = {Samina Raza Abidi and Samuel Alan Stewart and Michael A. Shepherd and Syed Sibte Raza Abidi},

url = {http://dx.doi.org/10.3233/978-1-61499-289-9-447},

year  = {2013},

date = {2013-01-01},

booktitle = {MEDINFO 2013 - Proceedings of the 14th World Congress on Medical and Health Informatics, 20-13 August 2013, Copenhagen, Denmark},

pages = {447--451},

crossref = {DBLP:conf/medinfo/2013},

keywords = {Clinical Decision Support Systems, Comorbidities, Ontology, Semantic Web, Usability Evaluation},

pubstate = {published},

tppubtype = {inproceedings}

}

@inproceedings{DBLP:conf/csws/JafarpourA13,

title = {A Semantic Web Based Ontology Mapping and Instance Transformation Framework},

author = {Borna Jafarpour and Syed Sibte Raza Abidi},

url = {http://ceur-ws.org/Vol-1054/paper-03.pdf},

year  = {2013},

date = {2013-01-01},

booktitle = {4th Canadian Semantic Web Symposium part of the Semantic Trilogy 2013, Montreal, QC, Canada, July 10th, 2013.},

pages = {5--11},

crossref = {DBLP:conf/csws/2013},

keywords = {Ontology Mapping, OWL, Semantic Web},

pubstate = {published},

tppubtype = {inproceedings}

}

@inproceedings{DBLP:conf/aime/AbidiA13,

title = {An Ontology-Driven Personalization Framework for Designing Theory-Driven Self-Management Interventions},

author = {Syed Sibte Raza Abidi and Samina Raza Abidi},

url = {http://dx.doi.org/10.1007/978-3-319-03916-9_8},

year  = {2013},

date = {2013-01-01},

booktitle = {Process Support and Knowledge Representation in Health Care - AIME 2013 Joint Workshop, KR4HC 2013/ProHealth 2013, Murcia, Spain, June 1, 2013, Revised Selected Papers},

pages = {97--112},

crossref = {DBLP:conf/aime/2013k},

keywords = {Behaviour Modelling, Ontology, Patient Education, Self-Management, Semantic Web, Social Cognition Theory},

pubstate = {published},

tppubtype = {inproceedings}

}

@inproceedings{DBLP:conf/compsac/HussainRDA11,

title = {Detecting and Resolving Inconsistencies in Ontologies Using Contradiction Derivations},

author = {Sajjad Hussain and Jos De Roo and Ali Daniyal and Syed Sibte Raza Abidi},

url = {http://dx.doi.org/10.1109/COMPSAC.2011.76},

year  = {2011},

date = {2011-01-01},

booktitle = {35th Annual IEEE International Computer Software and Applications Conference, Munich, Germany, 18-22 July 2011},

pages = {556--561},

crossref = {DBLP:conf/compsac/2011},

keywords = {Knowledge Management, Ontology, Semantic Web},

pubstate = {published},

tppubtype = {inproceedings}

}

@inproceedings{daniyal2010semantic,

title = {Semantic Web-based modeling of Clinical Pathways using the UML Activity Diagrams and OWL-S},

author = {Ali Daniyal and Syed Sibte Raza Abidi},

year  = {2010},

date = {2010-01-01},

booktitle = {Knowledge Representation for Health-Care. Data, Processes and Guidelines},

pages = {88-99},

publisher = {Springer},

keywords = {Clinical Pathways, Knowledge Modelling, OWL-S, Semantic Web, UML},

pubstate = {published},

tppubtype = {inproceedings}

}

@inproceedings{DBLP:conf/aime/DaniyalA09,

title = {Semantic Web-Based Modeling of Clinical Pathways Using the UML Activity Diagrams and OWL-S},

author = {Ali Daniyal and Syed Sibte Raza Abidi},

url = {http://dx.doi.org/10.1007/978-3-642-11808-1_8},

year  = {2009},

date = {2009-01-01},

booktitle = {Knowledge Representation for Health-Care: Data, Processes and Guidelines, AIME 2009 Workshop KR4HC 2009, Verona, Italy, July 19, 2009, Revised Selected and Invited Papers},

pages = {88--99},

crossref = {DBLP:conf/aime/2009k},

keywords = {Clinical Pathways, Knowledge Modelling, Semantic Web, UML},

pubstate = {published},

tppubtype = {inproceedings}

}

@inproceedings{DBLP:conf/cbms/HurleyA07,

title = {Ontology Engineering to Model Clinical Pathways: Towards the Computerization and Execution of Clinical Pathways},

author = {Katrina F. Hurley and Syed Sibte Raza Abidi},

url = {http://doi.ieeecomputersociety.org/10.1109/CBMS.2007.79},

year  = {2007},

date = {2007-01-01},

booktitle = {20th IEEE International Symposium on Computer-Based Medical Systems (CBMS 2007), 20-22 June 2007, Maribor, Slovenia},

pages = {536--541},

crossref = {DBLP:conf/cbms/2007},

keywords = {Clinical Pathways, Knowledge Management, Knowledge Modelling, Ontology, Ontology Engineering, Semantic Web},

pubstate = {published},

tppubtype = {inproceedings}

}

@inproceedings{DBLP:conf/cbms/AbidiH07,

title = {Medical Knowledge Morphing via a Semantic Web Framework},

author = {Syed Sibte Raza Abidi and Sajjad Hussain},

url = {http://doi.ieeecomputersociety.org/10.1109/CBMS.2007.70},

year  = {2007},

date = {2007-01-01},

booktitle = {20th IEEE International Symposium on Computer-Based Medical Systems (CBMS 2007), 20-22 June 2007, Maribor, Slovenia},

pages = {554--562},

crossref = {DBLP:conf/cbms/2007},

keywords = {Knowledge Management, Knowledge Morphing, Semantic Web},

pubstate = {published},

tppubtype = {inproceedings}

}

@inproceedings{DBLP:conf/aime/HussainAA07,

title = {Semantic Web Framework for Knowledge-Centric Clinical Decision Support Systems},

author = {Sajjad Hussain and Samina Raza Abidi and Syed Sibte Raza Abidi},

url = {http://dx.doi.org/10.1007/978-3-540-73599-1_60},

year  = {2007},

date = {2007-01-01},

booktitle = {Artificial Intelligence in Medicine, 11th Conference on Artificial Intelligence in Medicine, AIME 2007, Amsterdam, The Netherlands, July 7-11, 2007, Proceedings},

pages = {451--455},

crossref = {DBLP:conf/aime/2007},

keywords = {Clinical Decision Support Systems, Knowledge Management, Knowledge Modelling, Semantic Web},

pubstate = {published},

tppubtype = {inproceedings}

}

@inproceedings{DBLP:conf/hicss/HussainA07,

title = {Ontology Driven CPG Authoring and Execution via a Semantic Web Framework},

author = {Sajjad Hussain and Syed Sibte Raza Abidi},

url = {http://dx.doi.org/10.1109/HICSS.2007.408},

year  = {2007},

date = {2007-01-01},

booktitle = {40th Hawaii International International Conference on Systems Science (HICSS-40 2007), CD-ROM / Abstracts Proceedings, 3-6 January 2007, Waikoloa, Big Island, HI, USA},

pages = {135},

crossref = {DBLP:conf/hicss/2007},

keywords = {Clinical Decision Support Systems, CPG Computerization, Knowledge Execution, Ontology, Ontology Engineering, Semantic Web},

pubstate = {published},

tppubtype = {inproceedings}

}

@inproceedings{DBLP:conf/medinfo/AbidiAHS07,

title = {Ontology-based Modeling of Clinical Practice Guidelines: A Clinical Decision Support System for Breast Cancer Follow-up Interventions at Primary Care Settings},

author = {Samina Abidi and Syed Sibte Raza Abidi and Sajjad Hussain and Michael A. Shepherd},

url = {http://dx.doi.org/10.3233/978-1-58603-774-1-845},

year  = {2007},

date = {2007-01-01},

booktitle = {MEDINFO 2007 - Proceedings of the 12th World Congress on Health (Medical) Informatics - Building Sustainable Health Systems, 20-24 August, 2007, Brisbane, Australia},

pages = {845--849},

crossref = {DBLP:conf/medinfo/2007},

keywords = {Breast Cancer, Clinical Decision Support Systems, Clinical Practice Guidelines, CPG Computerization, Ontology, Semantic Web},

pubstate = {published},

tppubtype = {inproceedings}

}