Publications

247 entries « 1 of 5 »

2022

William Van Woensel; Samina Abidi; Karthik Tennankore; George Worthen; Syed Sibte Raza Abidi

Explainable Decision Support using Task Network Models in Notation3: Computerizing Lipid Management Clinical Guidelines as Interactive Task Networks Inproceedings

In: 20th International Conference on Artificial Intelligence in Medicine (AIME 2022), June 14-17, 2022, Halifax, Springer, 2022.

BibTeX | Tags: Clinical Decision Support Systems, Clinical guidelines, Notation3, Semantic Web reasoning, Task Network Models

William Van Woensel; Samina Abidi; Karthik Tennankore; George Worthen; Syed Sibte Raza Abidi

Clinical Guidelines as Executable and Interactive Workflows with FHIR-Compliant Health Data Input using GLEAN Inproceedings

In: 20th International Conference on Artificial Intelligence in Medicine (AIME 2022): Demo Track, June 14-17, Halifax, 2022, Springer, 2022.

BibTeX | Tags: Clinical Decision Support Systems, Clinical guidelines, Notation3, Semantic Web reasoning, Task Network Models

William Van Woensel; Floriano Scioscia; Giuseppe Loseto; Oshani Seneviratne; Evan Patton; Samina Abidi; Lalana Kagal

Explainable Clinical Decision Support: Towards Patient-Facing Explanations for Education and Long-term Behavior Change Inproceedings

In: 20th International Conference on Artificial Intelligence in Medicine (AIME 2022): Demo Track, June 14-17, Halifax, 2022, Springer, 2022.

BibTeX | Tags: Explainability, Semantic Web reasoning

Jaber Rad; Karthik Tennankore; Amanda Vinson; Syed Sibte Raza Abidi

Extracting Surrogate Decision Trees from Black-box Models to Explain the Temporal Importance of Clinical Features in Predicting Kidney Graft Survival Inproceedings

In: 20th International Conference on Artificial Intelligence in Medicine (AIME 2022), June 14-17, 2022, Halifax, Springer, 2022.

BibTeX | Tags: Explainability, Kidney Disease, Machine Learning

Ali Daowd; Samina Abidi; Syed Sibte Raza Abidi

Knowledge Graph Completion Method Applied to Literature-Based Discovery for Predicting Missing Links Targeting Cancer Drug Repurposing Inproceedings

In: 20th International Conference on Artificial Intelligence in Medicine (AIME 2022), June 14-17, 2022, Halifax, Springer, 2022.

BibTeX | Tags: Knowledge Graphs, Link Prediction, Literature-Based Discovery

Kathryn Young-Shand; Patrice C. Roy; Michael Dunbar; Syed Sibte Raza Abidi; J. Wilson

Assessing Knee Osteoarthritis Severity and Biomechanical Changes After Total Knee Arthroplasty Using Self-Organizing Maps Inproceedings

In: 20th International Conference on Artificial Intelligence in Medicine (AIME 2022), June 14-17, 2022, Halifax, Springer, 2022.

BibTeX | Tags: Self-Organizing Maps, Total knee arthroplasty

William Van Woensel; Brett Taylor; Syed Sibte Raza Abidi

Towards an Adaptive Clinical Transcription System for In-Situ Transcribing of Patient Encounter Information Inproceedings

In: Studies in Health Technology and Informatics, pp. 158–162, 2022, ISSN: 1879-8365.

Abstract | Links | BibTeX | Tags: Dictaphone, Machine Learning

S. Majouni; JC. Kim; E. Sweeny; E. Keltie; Syed Sibte Raza Abidi

Applying Machine Learning to Arsenic Species and Metallomics Profiles of Toenails to Evaluate Associations of Environmental Arsenic with Incident Cancer Cases Inproceedings

In: International Conference on Medical Informatics in Europe (MIE2022), May 26-30, 2022, Nice, France, Springer, 2022.

BibTeX | Tags: Environmental Arsenic, Incident Cancer Cases, Machine Learning

Kathryn L. Young-Shand; Patrice C. Roy; Michael J. Dunbar; Syed S. R. Abidi; Janie L. Astephen Wilson

Gait biomechanics phenotypes among total knee arthroplasty candidates by machine learning cluster analysis Journal Article

In: Journal of Orthopaedic Research, 2022.

Abstract | Links | BibTeX | Tags: gait analysis, knee biomechanics, Machine Learning, phenotypes, Total knee arthroplasty

Benjamin Rose-Davis; William Van Woensel; Samina Raza Abidi; Elizabeth Stringer; Syed Sibte Raza Abidi

Semantic Knowledge Modeling and Evaluation of Argument Theory to Develop Dialogue based Patient Education Systems for Chronic Disease Self-Management Journal Article

In: International Journal of Medical Informatics, 2022.

Links | BibTeX | Tags: Argument Theory, Knowledge Graphs, Patient Education, Semantic Web

2021

D O'Sullivan; W Van Woensel; S Wilk; S W Tu; W Michalowski; S Abidi; M Carrier; R Edry; I Hochberg; S Kingwell; K Kogan; M Michalowski; H O'Sullivan; M Peleg

Towards a framework for comparing functionalities of multimorbidity clinical decision support: A literature-based feature set and benchmark cases Inproceedings

In: AMIA 2021 Annual Symposium, San Diego, CA, 2021.

BibTeX | Tags: Clinical Decision Support Systems, Comorbidity

G Loseto; E Patton; O Seneviratne; W Van Woensel; F Scioscia; L Kagal

Mobile App Development for the Semantic Web of Things with Punya Inproceedings

In: 20th International Semantic Web Conference: Demo Track (ISWC '21), 2021.

BibTeX | Tags: Internet of Things, Mobile Computing, Semantic Web

Oshani Seneviratne; William Van Woensel; Giuseppe Loseto; Floriano Scioscia; Evan Patton; Lalana Kagal

Rapid Prototyping of Mobile Apps for Clinical Research using Semantic Web Technologies Inproceedings

In: 20th International Semantic Web Conference: Demo Track (ISWC '21), 2021.

BibTeX | Tags: Mobile Computing, Mobile Health, Semantic Web

Evan Patton; William Van Woensel; Oshani Seneviratne; Giuseppe Loseto; Floriano Scioscia; Lalana Kagal

The Punya Platform: Building Mobile Research Apps with Linked Data and Semantic Features Inproceedings

In: 20th International Semantic Web Conference (ISWC '21), 2021.

BibTeX | Tags: Mobile Computing, Mobile Health, Semantic Web

William Van Woensel; Samina Abidi; Syed Sibte Raza Abidi

Towards Model-Driven Semantic Interfaces for Electronic Health Records on Multiple Platforms Using Notation3 Inproceedings

In: 4th International Workshop on Semantic Web Meets Health Data Management (SWH’21) co-located with 20th International Semantic Web Conference (ISWC’21), 2021.

Links | BibTeX | Tags: Electronic Medical Record, Model-driven Engineering, Semantic Web

Syed Asil Ali Naqvi; Karthik Tennankore; Amanda Vinson; Patrice C Roy; Syed Sibte Raza Abidi

Predicting Kidney Graft Survival Using Machine Learning Methods: Prediction Model Development and Feature Significance Analysis Study Journal Article

In: Journal of Medical Internet Research, 23 (8), pp. e26843, 2021, ISSN: 1438-8871.

Abstract | Links | BibTeX | Tags: dimensionality reduction, feature sensitivity analysis, survival prediction

William Van Woensel; Manal Elnenaei; Syed Sibte Raza Abidi; David B Clarke; Syed Ali Imran

Staged Reflexive Artificial Intelligence Driven Testing Algorithms for Early Diagnosis of Pituitary Disorders Journal Article

In: Clinical Biochemistry, 2021.

Links | BibTeX | Tags: Clinical Decision Support Systems, Health Informatics, Reflex Protocols

Ali Daowd; Michael Barrett; Samina Abidi; Syed Sibte Raza Abidi

A Framework To Build A Causal Knowledge Graph for Chronic Diseases and Cancers By Discovering Semantic Associations from Biomedical Literature Inproceedings

In: 2021 IEEE International Conference on Healthcare Informatics (ICHI), Victoria, BC, Canada, IEEE, 2021, ISBN: 978-1-6654-0132-6.

Links | BibTeX | Tags: Causal relations, Chronic Illness, Knowledge Graphs

William Van Woensel; Syed Sibte Raza Abidi; Samina Raza Abidi

Decision support for comorbid conditions via execution-time integration of clinical guidelines using transaction-based semantics and temporal planning Journal Article

In: Artificial Intelligence in Medicine, 118 , pp. 102127, 2021, ISSN: 0933-3657.

Abstract | Links | BibTeX | Tags: Clinical guidelines, Comorbidity, Decision Support Systems

William Van Woensel; Manal Elnenaei; Syed Ali Imran; Syed Sibte Raza Abidi

Semantic Web Framework to Computerize Staged Reflex Testing Protocols to Mitigate Underutilization of Pathology Tests for Diagnosing Pituitary Disorders Inproceedings

In: International Conference on Artificial Intelligence in Medicine (AIME), 2021.

BibTeX | Tags: Clinical Decision Support Systems, Reflex Protocols, Semantic Web

Syed Asil Ali Naqvi; Karthik Tennankore; Amanda Vinson; Syed Sibte Raza Abidi

Analyzing Association Rules for Graft Failure Following Deceased and Live Donor Kidney Transplantation Inproceedings

In: 31st Medical Informatics Europe (MIE2021), 2021.

BibTeX | Tags: Association Rules, Machine Learning

Jaber Rad; Jason Quinn; Calvino Cheng; Robert Liwski; Samina Raza Abidi; Syed Sibte Raza Abidi

Using Interactive Visual Analytics to Optimize in Real-Time Blood Products Inventory at a Blood Bank Inproceedings

In: 31st Medical Informatics Europe (MIE2021), 2021.

BibTeX | Tags: Blood Inventory Management, Clinical Decision Support Systems, Visual analytics

Ali Daowd; Michael Barrett; Samina Raza Abidi; Syed Sibte Raza Abidi

Building a Knowledge Graph Representing Causal Associations between Risk Factors and Incidence of Breast Cancer Inproceedings

In: 31st Medical Informatics Europe (MIE2021), 2021.

BibTeX | Tags: Knowledge Graphs, Risk Factors

William Van Woensel; Chad Armstrong; Malavan Rajaratnam; Vaibhav Gupta; Syed Sibte Raza Abidi

Using Knowledge Graphs to Plausibly Infer Missing Associations in EMR Data Inproceedings

In: 31st Medical Informatics Europe (MIE2021), pp. 417-421, 2021.

Links | BibTeX | Tags: Clinical Decision Support Systems, Knowledge Graphs, Plausible reasoning, Semantic Similarity

Aditi Nair; Syed Sibte Raza Abidi; William Van Woensel; Samina Raza Abidi

Ontology-based Personalized Cognitive Behavioural Plans for Patients with Mild Depression Inproceedings

In: 31st Medical Informatics Europe (MIE2021), pp. 729-733, 2021.

Links | BibTeX | Tags: Behavioural Change Theory, Ontology Engineering

Michael Barrett; Ali Daowd; Samina Raza Abidi; Syed Sibte Raza

A Knowledge Graph of Mechanistic Associations Between COVID-19, Diabetes Mellitus and Kidney Diseases Inproceedings

In: 31st Medical Informatics Europe (MIE2021), 2021.

BibTeX | Tags: CoVid-19, Knowledge Graphs

2020

Azra Naseem; Kiran Qasim Ali; Audrey Juma; Afroz Sajwani; Basnama Ayaz Khan; Saleem Sayani; Syed Sibte Raza Abidi

Factors enabling and hindering an eLearning programme for nurses and midwives in Afghanistan Journal Article

In: Scholarship of Teaching and Learning in the South, 4 (2), pp. 80, 2020, ISSN: 2523-1154.

Abstract | Links | BibTeX | Tags: eLearning, Learning technology

William Van Woensel; Samina Abidi; Borna Jafarpour; Syed Sibte Raza Abidi

A CIG Integration Framework to Provide Decision Support for Comorbid Conditions using Transaction-based Semantics and Temporal Planning Inproceedings

In: International Conference on Artificial Intelligence in Medicine (AIME 2020), 2020.

Abstract | BibTeX | Tags: Clinical Decision Support Systems, Clinical Practice Guidelines, Comorbidities, Ontology, Semantic Web

Jaber Rad; Calvino Cheng; Jason G Quinn; Samina Abidi; Robert Liwski; Syed Sibte Raza Abidi

An AI-Driven Predictive Modelling Framework to Analyze and Visualize Blood Product Transactional Data for Reducing Blood Products’ Discards Inproceedings

In: International Conference on Artificial Intelligence in Medicine (AIME 2020), 2020.

Abstract | BibTeX | Tags: Big Data, Blood Inventory Management, Blood product wastage, Data visualization, Machine Learning, Sequence prediction, Visual analytics

Ignacio Miralles; Carlos Granell; Laura Díaz-Sanahuja; William Van Woensel; Juana Bretón-López; Adriana Mira; Diana Castilla; Sven Casteleyn

Smartphone Apps for the Treatment of Mental Disorders: Systematic Review Journal Article

In: JMIR Mhealth Uhealth, 8 (4), pp. e14897, 2020, ISSN: 2291-5222.

Abstract | Links | BibTeX | Tags: mental health; mental disorders; treatment; intervention; mHealth; smartphone; mobile phone; mobile apps; systematic review

Eseohen Imoukhome; Lori Weeks; Samina Abidi

Fall Prevention and Management App Prototype for the Elderly and Their Caregivers: Design, Implementation, and Evaluation Journal Article

In: International Journal of Extreme Automation and Connectivity in Healthcare, 2 , pp. 48-67, 2020.

Links | BibTeX | Tags:

William Van Woensel; Patrice C Roy; Syed Sibte Raza Abidi; Samina Raza Abidi

Indoor location identification of patients for directing virtual care: An AI approach using machine learning and knowledge-based methods Journal Article

In: Artificial Intelligence in Medicine, 108 , pp. 101931, 2020, ISSN: 0933-3657.

Abstract | Links | BibTeX | Tags: Activities of daily living, Ambient assisted living, Ambient Intelligence, Ambient sensors, Chronic disease self-management, Data fusion, eHealth Platform, Indoor Localization, Machine Learning, Self-Management, Semantic Web, Virtual care

2019

William Van Woensel; Samina Raza Abidi; Syed Sibte Raza Abidi

Pro-Actively Guiding Patients through ADL via Knowledge-Based and Context-Driven Activity Recognition Inproceedings

In: 17th World Congress on Medical and Health Informatics (MEDINFO'19), Aug 26-30, pp. 863 - 867, IOS Press, Lyon, France, 2019.

Links | BibTeX | Tags:

Ali Daowd; Syed M Faizan; Samina Raza Abidi; Ashraf Abusharekh; A Shehzad; Syed Sibte Raza Abidi

Towards Personalized Lifetime Health: A Platform for Early Multimorbid Chronic Disease Risk Assessment and Mitigation Inproceedings

In: 17th World Congress on Medical and Health Informatics (MEDINFO'19), Aug 26-30, pp. 935 - 939, Lyon, France, 2019.

Links | BibTeX | Tags:

William Van Woensel; Samina Raza Abidi; Borna Jafarpour; Syed Sibte Raza Abidi

Providing Comorbid Decision Support via the Integration of Clinical Practice Guidelines at Execution-Time by Leveraging Medical Linked Open Datasets Inproceedings

In: 17th World Congress on Medical and Health Informatics (MEDINFO'19), Aug 26-30, pp. 858 - 862, IOS Press, Lyon, France, 2019.

Links | BibTeX | Tags:

Raquel da Luz Diaz; Marcela de Oliveira Lima; João G B Alves; William Van Woensel; Asil Naqvi; Zahra Take; Syed Sibte Raza Abidi

A Digital Health Platform to Deliver Tailored Early Stimulation Programs for Children With Developmental Delay Inproceedings

In: 17th World Congress on Medical and Health Informatics (MEDINFO'19), Aug 26-30, pp. 571 - 575, IOS Press, Lyon, France, 2019.

Links | BibTeX | Tags:

Benjamin Rose-Davis; William Van Woensel; Elizabeth Stringer; Samina Raza Abidi; Syed Sibte Raza Abidi

Using Artificial Intelligence-Based Argument Theory To Generate Automated Patient Education Dialogues For Families Of Children With Juvenile Idiopathic Arthritis Inproceedings

In: 17th World Congress on Medical and Health Informatics (MEDINFO'19), Aug 26-30, pp. 1337 - 1341, Lyon, France, 2019.

Links | BibTeX | Tags:

Syed Sibte Raza Abidi; Jaber Rad; Ashraf Abusharekh; Patrice C. Roy; William Van Woensel; Samina Raza Abidi; Calvino Cheng; Bryan D. Crocker; Manal O. Elnenaei

AI-Driven Pathology Laboratory Utilization Management via Data- and Knowledge-Based Analytics Inproceedings

In: 17th Conf. on Artificial Intelligence in Medicine (AIME2019), June 26-29, pp. 241–251, Springer International Publishing, Poznan, Poland, 2019, ISBN: 978-3-030-21642-9.

Links | BibTeX | Tags:

Patrice C. Roy; William Van Woensel; Andy Wilcox; Syed Sibte Raza Abidi

Mobile Indoor Localization with Bluetooth Beacons in a Pediatric Emergency Department Using Clustering, Rule-based Classification and High-level Heuristics Inproceedings

In: 17th Conf. on Artificial Intelligence in Medicine (AIME2019), June 26-29, pp. 216–226, Springer International Publishing, Poznan, Poland, 2019, ISBN: 978-3-030-21642-9.

Links | BibTeX | Tags:

Kathryn Young-Shand; Patrice C. Roy; Syed Sibte Raza Abidi; Michael Dunbar; Janie Astephen Wilson

Clinical and Biomechanical Cluster Classification Before TKA Impacts Functional Outcome Inproceedings

In: 2nd International Combined Meeting of Orthopaedic Research Societies, June 19-22, 2019, Montreal, Canada, 2019.

Abstract | BibTeX | Tags: Clustering, Total knee arthroplasty

Syed Sibte Raza Abidi; Samina Raza Abidi

Intelligent health data analytics: A convergence of artificial intelligence and big data Journal Article

In: Healthcare Management Forum, 32 (4), pp. 178–182, 2019.

Abstract | Links | BibTeX | Tags:

Kathryn Young-Shand; Patrice C. Roy; Syed Sibte Raza Abidi; Michael Dunbar; Janie Astephen Wilson

Clinical and Biomechanical Cluster Classification Before TKA Impacts Functional Outcome Inproceedings

In: Orthopaedic Research Society Conference (ORS), February 2-5, 2019 Austin, Texas, USA, 2019, (Recipient of the American Academy of Orthopaedic Surgeons (AAOS) Women’s Health Advisory Board (WHAB) Award).

BibTeX | Tags: Clustering, Total knee arthroplasty

Borna Jafarpour; Samina Raza Abidi; William Van Woensel; Syed Sibte Raza Abidi

Execution-Time Integration of Clinical Practice Guidelines To Provide Decision Support for Comorbid Conditions Journal Article

In: Artificial Intelligence in Medicine, 94 , pp. 117-137, 2019, ISSN: 0933-3657.

Abstract | Links | BibTeX | Tags:

Patrice C Roy; William Van Woensel; Andy Wilcox; Syed Sibte Raza Abidi

Mobile Indoor Localization with Bluetooth Beacons in a Pediatric Emergency Department Using Clustering, Rule-based Classification and High-level Heuristics Inproceedings

In: 17th Conf. on Artificial Intelligence in Medicine (AIME2019), Poznan, Poland, 2019.

BibTeX | Tags:

Hani Nabeel Mufti; Gregory Marshal Hirsch; Samina Raza Abidi; Syed Sibte Raza Abidi

Exploiting Machine Learning Algorithms and Methods for the Prediction of Agitated Delirium After Cardiac Surgery: Models Development and Validation Study Journal Article

In: JMIR Med Inform, 7 (4), pp. e14993, 2019, ISSN: 2291-9694.

Abstract | Links | BibTeX | Tags: delirium; cardiac surgery; machine learning; predictive modeling

Doerthe Arndt; William Van Woensel

Towards Supporting Multiple Semantics of Named Graphs Using N3 Rules Inproceedings

In: Proceedings of the 13th RuleML+RR 2019 Doctoral Consortium and Rule Challenge, September 16-19, 2019 - Bolzano, Italy, September 16-24, 2019, CEUR-WS.org, 2019.

Abstract | Links | BibTeX | Tags:

2018

Syed S.R. Abidi; Patrice C. Roy; Muhammad S. Shah; Jin Yu; Sanjun Yan

A data mining framework for glaucoma decision support based on optic nerve image analysis using machine learning methods Journal Article

In: Journal of Healthcare Informatics Research, 2 (4), pp. 370-401, 2018.

Links | BibTeX | Tags: Classification, Clustering, Data Mining, Decision Support Systems, Optic Nerve

Tyler S Wheeler; Michael T Vallis; Nicholas B Giacomantonio; Samina R Abidi

Feasibility and usability of an ontology-based mobile intervention for patients with hypertension Journal Article

In: International Journal of Medical Informatics, 119 , pp. 8 - 16, 2018, ISSN: 1386-5056.

Links | BibTeX | Tags: Behaviour change, Chronic disease self-management, Hypertension, Mobile Health, Ontology

William Van Woensel; Syed Sibte Raza Abidi

Benchmarking Semantic Reasoning on Mobile Platforms: Towards Optimization Using OWL2 RL Journal Article

In: Semantic Web Journal, 2018.

Abstract | Links | BibTeX | Tags: Mobile Computing, OWL2 RL, Semantic Web reasoning

Hossein Mohammadhassanzadeh; Samina Abidi; William Van Woensel; Syed Sibte Raza Abidi

Investigating Plausible Reasoning over Knowledge Graphs for Semantics-based Health Data Analytics Inproceedings

In: Data Exploration in the Web 3.0 Age (DEW) conference track at 27th IEEE International Conference on Enabling Technologies: Infrastructure for Collaborative Enterprises (WETICE’18), IEEE, Paris, France, 2018.

Links | BibTeX | Tags: Plausible reasoning, Query Rewriting, Semantic Analytics, Semantic Web reasoning

247 entries « 1 of 5 »