About Me
Research Interests
Your research interests.
Publications
2016
Borna Jafarpour; Syed Sibte Raza Abidi; Samina Raza Abidi
Exploiting Semantic Web Technologies to Develop OWL-Based Clinical Practice Guideline Execution Engines Journal Article
In: IEEE Journal of Biomedical and Health Informatics, vol. 20, no. 1, pp. 388-398, 2016, ISSN: 2168-2194.
Abstract | Links | BibTeX | Tags: Clinical Decision Support Systems, Clinical Practice Guidelines, OWL, Semantic Web
@article{Jafarpour:IeeeJournalOfBiomedicalAndHealthInformat,
title = {Exploiting Semantic Web Technologies to Develop OWL-Based Clinical Practice Guideline Execution Engines},
author = {Borna Jafarpour and Syed Sibte Raza Abidi and Samina Raza Abidi},
url = {http://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=6990486&isnumber=7369993},
doi = {10.1109/JBHI.2014.2383840},
issn = {2168-2194},
year = {2016},
date = {2016-01-01},
journal = {IEEE Journal of Biomedical and Health Informatics},
volume = {20},
number = {1},
pages = {388-398},
abstract = {Computerizing paper-based CPG and then executing them can provide evidence-informed decision support to physicians at the point of care. Semantic web technologies especially Web Ontology Language (OWL) ontologies have been profusely used to represent computerized CPG. Using semantic web reasoning capabilities to execute OWL based computerized CPG unties them from a specific custom-built CPG execution engine and increases their shareability as any OWL reasoner and triple store can be utilized for CPG execution. However, existing semantic web reasoning based CPG execution engines suffer from lack of ability to execute CPG with high levels of expressivity, high cognitive load of computerization of paper-based CPG and updating their computerized versions. In order to address these limitations, we have developed three CPG execution engines based on OWL 1 DL, OWL 2 DL and OWL 2 DL + Semantic Web Rule Language (SWRL). OWL 1 DL serves as the base execution engine capable of executing a wide range of CPG constructs, however for executing highly complex CPG the OWL 2 DL and OWL 2 DL + SWRL offer additional executional capabilities. We evaluated the technical performance and medical correctness of our execution engines using a range of CPG. Technical evaluations show the efficiency of our CPG execution engines in terms of CPU time and validity of the generated recommendation in comparison to existing CPG execution engines. Medical evaluations by domain experts show the validity of the CPG-mediated therapy plans in terms of relevance, safety, and ordering for a wide range of patient scenarios.},
keywords = {Clinical Decision Support Systems, Clinical Practice Guidelines, OWL, Semantic Web},
pubstate = {published},
tppubtype = {article}
}
2013
Borna Jafarpour; Syed Sibte Raza Abidi
A Semantic Web Based Ontology Mapping and Instance Transformation Framework Proceedings Article
In: 4th Canadian Semantic Web Symposium part of the Semantic Trilogy 2013, Montreal, QC, Canada, July 10th, 2013., pp. 5–11, 2013.
Links | BibTeX | Tags: Ontology Mapping, OWL, Semantic Web
@inproceedings{DBLP:conf/csws/JafarpourA13,
title = {A Semantic Web Based Ontology Mapping and Instance Transformation Framework},
author = {Borna Jafarpour and Syed Sibte Raza Abidi},
url = {http://ceur-ws.org/Vol-1054/paper-03.pdf},
year = {2013},
date = {2013-01-01},
booktitle = {4th Canadian Semantic Web Symposium part of the Semantic Trilogy 2013, Montreal, QC, Canada, July 10th, 2013.},
pages = {5--11},
crossref = {DBLP:conf/csws/2013},
keywords = {Ontology Mapping, OWL, Semantic Web},
pubstate = {published},
tppubtype = {inproceedings}
}
2012
Samina Raza Abidi; Jafna Cox; Syed Sibte Raza Abidi; Michael A. Shepherd
Using OWL Ontologies for Clinical Guidelines Based Comorbid Decision Support Proceedings Article
In: 45th Hawaii International International Conference on Systems Science (HICSS-45 2012), Proceedings, 4-7 January 2012, Grand Wailea, Maui, HI, USA, pp. 3030–3038, 2012.
Links | BibTeX | Tags: Clinical Decision Support Systems, Clinical Practice Guidelines, Comorbidities, OWL
@inproceedings{DBLP:conf/hicss/AbidiCAS12,
title = {Using OWL Ontologies for Clinical Guidelines Based Comorbid Decision Support},
author = {Samina Raza Abidi and Jafna Cox and Syed Sibte Raza Abidi and Michael A. Shepherd},
url = {http://dx.doi.org/10.1109/HICSS.2012.629},
year = {2012},
date = {2012-01-01},
booktitle = {45th Hawaii International International Conference on Systems Science (HICSS-45 2012), Proceedings, 4-7 January 2012, Grand Wailea, Maui, HI, USA},
pages = {3030--3038},
crossref = {DBLP:conf/hicss/2012},
keywords = {Clinical Decision Support Systems, Clinical Practice Guidelines, Comorbidities, OWL},
pubstate = {published},
tppubtype = {inproceedings}
}
2011
Ashraf Mohammed Iqbal; Michael A. Shepherd; Syed Sibte Raza Abidi
An Ontology-Based Electronic Medical Record for Chronic Disease Management Proceedings Article
In: 44th Hawaii International International Conference on Systems Science (HICSS-44 2011), Proceedings, 4-7 January 2011, Koloa, Kauai, HI, USA, pp. 1–10, 2011.
Links | BibTeX | Tags: Chronic Disease Management, Electronic Medical Record, Ontology, OWL
@inproceedings{DBLP:conf/hicss/IqbalSA11,
title = {An Ontology-Based Electronic Medical Record for Chronic Disease Management},
author = {Ashraf Mohammed Iqbal and Michael A. Shepherd and Syed Sibte Raza Abidi},
url = {http://dx.doi.org/10.1109/HICSS.2011.61},
year = {2011},
date = {2011-01-01},
booktitle = {44th Hawaii International International Conference on Systems Science (HICSS-44 2011), Proceedings, 4-7 January 2011, Koloa, Kauai, HI, USA},
pages = {1--10},
crossref = {DBLP:conf/hicss/2011},
keywords = {Chronic Disease Management, Electronic Medical Record, Ontology, OWL},
pubstate = {published},
tppubtype = {inproceedings}
}