Harini Shree Bhaskaran

About Me

Research Interests

Machine Learning, Data Visualization and Data Analysis.

Publications


283 entries « 1 of 6 »

2024

Nelofar Kureshi; Syed Sibte Raza Abidi; David B. Clarke; Weiping Zeng; Cindy Feng

Investigating the influence of socioeconomic deprivation on spatial patterns of traumatic brain injuries through Bayesian spatial modeling Journal Article

In: GeoJournal, vol. 89, iss. 6, no. 238, 2024.

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Nelofar Kureshi; Abraham Nunes; Cindy Feng; David B Clarke; Syed Sibte Raza Abidi

Risk stratification of new-onset psychiatric disorders using clinically distinct traumatic brain injury phenotypes Journal Article

In: Archives of Public Health, vol. 82, iss. 1, pp. 116, 2024.

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Nelofar Kureshi; Syed Sibte Raza Abidi

A Topological Data Analysis of Un met Health Care Needs Among Injured Patients Proceedings Article

In: 2024 IEEE 12th International Conference on Healthcare Informatics (ICHI), pp. 505-511, IEEE, 2024.

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Nelofar Kureshi; Syed Sibte Raza Abidi; David B Clarke; Weiping Zeng; Cindy Feng

Spatial hotspots and sociodemographic profiles associated with traumatic brain injury in Nova Scotia Journal Article

In: Journal of neurotrauma, vol. 41, iss. 7-8, pp. 844-861, 2024.

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Jaber Rad; Karthik Tennankore; Samina Abidi; Syed Sibte Raza Abidi

Extracting Decision Paths via Surrogate Modeling for Explainability of Black Box Classifiers Proceedings Article

In: 2024 11th IEEE Swiss Conference on Data Science (SDS), pp. 213-220, IEEE, 2024.

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Hossein Mohammadhassanzadeh; Samina Raza Abidi; Syed Sibte Raza Abidi

Plausible Reasoning over Large Health Datasets: A Novel Approach to Data Analytics Leveraging Semantics Journal Article

In: Knowledge-Based Systems, 2024.

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Nelofar Kureshi; David B. Clarke; Syed Sibte Raza Abidi

Utilizing Topological Clustering on a Traumatic Brain Injury Cohort: The Association of Neighborhood Socioeconomic Deprivation Profiles with Injury Mortality Proceedings Article

In: Health Informatics Knowledge Management Conference, Online, Feb1-2 2024. ACM Press, 2024.

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2023

Nelofar Kureshi; Syed Sibte Raza Abidi; David B Clarke; Weiping Zeng; Cindy Feng

Spatial Hotspots and Sociodemographic Profiles Associated with Traumatic Brain Injury in Nova Scotia Journal Article

In: Journal of Neurotrauma, 2023.

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Kyle W. Eastwood; Ronald May; Pantelis Andreou; Samina Abidi; Syed Sibte Raza Abidi; Osama M. Loubani

Needs and expectations for artificial intelligence in emergency medicine according to Canadian physicians Journal Article

In: BMC Health Services Research, vol. 23, no. 798, 2023, ISSN: 1472-6963.

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Sheida Majouni; Karthik Tennankore; Syed Sibte Raza Abidi

Predicting Urgent Dialysis at Ambulance Transport to the Emergency Department Using Machine Learning Methods Proceedings Article

In: 19th World Congress on Medical and Health Informatics (MEDINFO 2023), 8–12 July 2023, Sydney, Australia, 2023.

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Syed Sibte Raza Abidi; Kranthi Jalakam; Syed Hani Raza Abidi; Karthik Tennankore

Ensemble Clustering to Generate Phenotypes of Kidney Transplant Donors and Recipients Proceedings Article

In: 19th World Congress on Medical and Health Informatics (MEDINFO 2023), 8–12 July 2023, Sydney, Australia, 2023.

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Samina Abidi; Tracey Rickards; William Van Woensel; Syed Sibte Raza Abidi

Digital Therapeutics for COPD Patient Self-Management: Needs Analysis and Design Study Proceedings Article

In: 19th World Congress on Medical and Health Informatics (MEDINFO 2023), 8–12 July 2023, Sydney, Australia, 2023.

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Syed Hani Raza Abidi; Nur Zincir-Heywood; Syed Sibte Raza Abidi; Kranthi Jalakam; Samina Abidi; Lakshman Gunaratnam; Rita Suri; Héloïse Cardinale; Amanda Vinson; Bhanu Prasad; Michael Walsh; Seychelle Yohanna; George Worthen; Karthik Tennankore

Characterizing Cluster-Based Frailty Phenotypes in a Multicenter Prospective Cohort of Kidney Transplant Candidates Proceedings Article

In: MEDINFO 2023—The Future Is Accessible, pp. 896-900, IOS Press, 2023.

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Syed Sibte Raza Abidi; Asil Naqvi; George Worthen; Amanda Vinson; Samina Abidi; Bryce Kiberd; Thomas Skinner; Kenneth West; Karthik K Tennankore

Multi-view clustering to identify novel kidney donor phenotypes for assessing graft survival in older transplant recipients Journal Article

In: Kidney360, 2023.

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William Van Woensel; Samina Abidi; Syed Sibte Raza Abidi

Decentralized Web-based Clinical Decision Support using Semantic GLEAN Workflows Proceedings Article

In: 21th International Conference on Artificial Intelligence in Medicine (AIME 2023), June 12-15, 2023, Portoroz, Slovenia, 2023.

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William Van Woensel; Samson W. Tu; Wojtek Michalowski; Syed Sibte Raza Abidi; Samina Abidi; Jose-Ramon Alonso; Alessio Bottrighi; Marc Carrier; Ruth Edry; Irit Hochberg; Malvika Rao; Stephen Kingwell; Alexandra Kogan; Mar Marcos; Begoña Martínez Salvador; Martin Michalowski; Luca Piovesan; David Riaño; Paolo Terenziani; Szymon Wilk; Mor Peleg

A Community-of-Practice-based Evaluation Methodology for Knowledge Intensive Computational Methods and its Application to Multimorbidity Decision Support Journal Article

In: Journal of Biomedical Informatics, vol. 142, no. 104395, 2023, ISSN: 1532-0464.

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Nelofar Kureshi; Syed Sibte Raza Abidi; David B. Clarke; Cindy Feng

A Spatial and Spatiotemporal Analysis of Traumatic Brain Injury: Mapping High-Risk Neighborhoods to Inform Public Health Proceedings Article

In: Canadian Public Health Conference (Public Health 2023), June 20-22, 2023, 2023.

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Nelofar Kureshi; Syed Sibte Raza Abidi; David B. Clarke; Cindy Feng

Geospatial and Machine Learning Methods for Identifying Hotspots of Traumatic Brain Injury Proceedings Article

In: Trauma Association of Canada Annual Scientific Meeting and Conference April 20-21, 2023, Edmonton, Alberta, Canada, 2023.

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Belinda Agyapong; Charles Chishimba; Yifeng Wei; Raquel Luz Dias; Ejemai Eboreime; Eleanor Msidi; Syed Sibte Raza Abidi; Maryn Mutaka-Loongo; James Mwansa; Rita Orji; John Mathias Zulu; Vincent Israel Opoku Agyapong

Improving Mental Health Literacy and Reducing Psychological Problems Among Teachers in Zambia: Protocol for Implementation and Evaluation of a Wellness4Teachers Email Messaging Program Journal Article

In: JMIR Res Protoc, vol. 12, pp. e44370, 2023, ISSN: 1929-0748.

Abstract | Links | BibTeX | Tags: burnout; stress; Zambia; Africa; teacher; educator; school; anxiety; wellness; depression; e-mental health; intervention; health literacy; mental health; depressive; psychological issue; psychological problem; text message; messaging; decision-making

Nelofar Kureshi; Syed Sibte Raza Abidi; David B. Clarke; Cindy Feng

A Geospatial Analysis of the Burden of Traumatic Brain injury Proceedings Article

In: Brain Repair Centre Research Day, February 23, 2023, Halifax, Nova Scotia, Canada, 2023.

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Syed Hani Raza Abidi; Nur Zincir-Heywood; Syed Sibte Raza Abidi; Kranthi Jalakam; Samina Abidi; L. Gunaratnam; R. Suri; H. Cardinale; A. Vinson; B. Prasad; M. Walsh; S. Yohanna; George Worthen; Karthik Tennankore

Characterizing Cluster-Based Frailty Phenotypes in a Multicenter Prospective Cohort of Kidney Transplant Candidates Proceedings Article

In: 19th World Congress on Medical and Health Informatics (MEDINFO 2023), 8–12 July 2023, Sydney, Australia, 2023.

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2022

William Van Woensel; Samina Abidi; Karthik Tennankore; George Worthen; Syed Sibte Raza Abidi

Explainable Decision Support using Task Network Models in Notation3: Computerizing Lipid Management Clinical Guidelines as Interactive Task Networks Proceedings Article

In: 20th International Conference on Artificial Intelligence in Medicine (AIME 2022), June 14-17, 2022, Halifax, Springer, 2022.

BibTeX | Tags: Clinical Decision Support Systems, Clinical guidelines, Notation3, Semantic Web reasoning, Task Network Models

William Van Woensel; Samina Abidi; Karthik Tennankore; George Worthen; Syed Sibte Raza Abidi

Clinical Guidelines as Executable and Interactive Workflows with FHIR-Compliant Health Data Input using GLEAN Proceedings Article

In: 20th International Conference on Artificial Intelligence in Medicine (AIME 2022): Demo Track, June 14-17, Halifax, 2022, Springer, 2022.

BibTeX | Tags: Clinical Decision Support Systems, Clinical guidelines, Notation3, Semantic Web reasoning, Task Network Models

William Van Woensel; Floriano Scioscia; Giuseppe Loseto; Oshani Seneviratne; Evan Patton; Samina Abidi; Lalana Kagal

Explainable Clinical Decision Support: Towards Patient-Facing Explanations for Education and Long-term Behavior Change Proceedings Article

In: 20th International Conference on Artificial Intelligence in Medicine (AIME 2022): Demo Track, June 14-17, Halifax, 2022, Springer, 2022.

BibTeX | Tags: Explainability, Semantic Web reasoning

Jaber Rad; Karthik Tennankore; Amanda Vinson; Syed Sibte Raza Abidi

Extracting Surrogate Decision Trees from Black-box Models to Explain the Temporal Importance of Clinical Features in Predicting Kidney Graft Survival Proceedings Article

In: 20th International Conference on Artificial Intelligence in Medicine (AIME 2022), June 14-17, 2022, Halifax, Springer, 2022.

BibTeX | Tags: Explainability, Kidney Disease, Machine Learning

Ali Daowd; Samina Abidi; Syed Sibte Raza Abidi

Knowledge Graph Completion Method Applied to Literature-Based Discovery for Predicting Missing Links Targeting Cancer Drug Repurposing Proceedings Article

In: 20th International Conference on Artificial Intelligence in Medicine (AIME 2022), June 14-17, 2022, Halifax, Springer, 2022.

BibTeX | Tags: Knowledge Graphs, Link Prediction, Literature-Based Discovery

Kathryn Young-Shand; Patrice C. Roy; Michael Dunbar; Syed Sibte Raza Abidi; J. Wilson

Assessing Knee Osteoarthritis Severity and Biomechanical Changes After Total Knee Arthroplasty Using Self-Organizing Maps Proceedings Article

In: 20th International Conference on Artificial Intelligence in Medicine (AIME 2022), June 14-17, 2022, Halifax, Springer, 2022.

BibTeX | Tags: Self-Organizing Maps, Total knee arthroplasty

William Van Woensel; Brett Taylor; Syed Sibte Raza Abidi

Towards an Adaptive Clinical Transcription System for In-Situ Transcribing of Patient Encounter Information Proceedings Article

In: Studies in Health Technology and Informatics, pp. 158–162, 2022, ISSN: 1879-8365.

Abstract | Links | BibTeX | Tags: Dictaphone, Machine Learning

S. Majouni; JC. Kim; E. Sweeny; E. Keltie; Syed Sibte Raza Abidi

Applying Machine Learning to Arsenic Species and Metallomics Profiles of Toenails to Evaluate Associations of Environmental Arsenic with Incident Cancer Cases Proceedings Article

In: International Conference on Medical Informatics in Europe (MIE2022), May 26-30, 2022, Nice, France, Springer, 2022.

BibTeX | Tags: Environmental Arsenic, Incident Cancer Cases, Machine Learning

Kathryn L. Young-Shand; Patrice C. Roy; Michael J. Dunbar; Syed S. R. Abidi; Janie L. Astephen Wilson

Gait biomechanics phenotypes among total knee arthroplasty candidates by machine learning cluster analysis Journal Article

In: Journal of Orthopaedic Research, 2022.

Abstract | Links | BibTeX | Tags: gait analysis, knee biomechanics, Machine Learning, phenotypes, Total knee arthroplasty

Benjamin Rose-Davis; William Van Woensel; Samina Raza Abidi; Elizabeth Stringer; Syed Sibte Raza Abidi

Semantic Knowledge Modeling and Evaluation of Argument Theory to Develop Dialogue based Patient Education Systems for Chronic Disease Self-Management Journal Article

In: International Journal of Medical Informatics, 2022.

Links | BibTeX | Tags: Argument Theory, Knowledge Graphs, Patient Education, Semantic Web

2021

D O'Sullivan; W Van Woensel; S Wilk; S W Tu; W Michalowski; S Abidi; M Carrier; R Edry; I Hochberg; S Kingwell; K Kogan; M Michalowski; H O'Sullivan; M Peleg

Towards a framework for comparing functionalities of multimorbidity clinical decision support: A literature-based feature set and benchmark cases Proceedings Article

In: AMIA 2021 Annual Symposium, San Diego, CA, 2021.

BibTeX | Tags: Clinical Decision Support Systems, Comorbidity

G Loseto; E Patton; O Seneviratne; W Van Woensel; F Scioscia; L Kagal

Mobile App Development for the Semantic Web of Things with Punya Proceedings Article

In: 20th International Semantic Web Conference: Demo Track (ISWC '21), 2021.

BibTeX | Tags: Internet of Things, Mobile Computing, Semantic Web

Oshani Seneviratne; William Van Woensel; Giuseppe Loseto; Floriano Scioscia; Evan Patton; Lalana Kagal

Rapid Prototyping of Mobile Apps for Clinical Research using Semantic Web Technologies Proceedings Article

In: 20th International Semantic Web Conference: Demo Track (ISWC '21), 2021.

BibTeX | Tags: Mobile Computing, Mobile Health, Semantic Web

Evan Patton; William Van Woensel; Oshani Seneviratne; Giuseppe Loseto; Floriano Scioscia; Lalana Kagal

The Punya Platform: Building Mobile Research Apps with Linked Data and Semantic Features Proceedings Article

In: 20th International Semantic Web Conference (ISWC '21), 2021.

BibTeX | Tags: Mobile Computing, Mobile Health, Semantic Web

William Van Woensel; Samina Abidi; Syed Sibte Raza Abidi

Towards Model-Driven Semantic Interfaces for Electronic Health Records on Multiple Platforms Using Notation3 Proceedings Article

In: 4th International Workshop on Semantic Web Meets Health Data Management (SWH’21) co-located with 20th International Semantic Web Conference (ISWC’21), 2021.

Links | BibTeX | Tags: Electronic Medical Record, Model-driven Engineering, Semantic Web

Syed Asil Ali Naqvi; Karthik Tennankore; Amanda Vinson; Patrice C Roy; Syed Sibte Raza Abidi

Predicting Kidney Graft Survival Using Machine Learning Methods: Prediction Model Development and Feature Significance Analysis Study Journal Article

In: Journal of Medical Internet Research, vol. 23, no. 8, pp. e26843, 2021, ISSN: 1438-8871.

Abstract | Links | BibTeX | Tags: dimensionality reduction, feature sensitivity analysis, survival prediction

William Van Woensel; Manal Elnenaei; Syed Sibte Raza Abidi; David B Clarke; Syed Ali Imran

Staged Reflexive Artificial Intelligence Driven Testing Algorithms for Early Diagnosis of Pituitary Disorders Journal Article

In: Clinical Biochemistry, 2021.

Links | BibTeX | Tags: Clinical Decision Support Systems, Health Informatics, Reflex Protocols

Ali Daowd; Michael Barrett; Samina Abidi; Syed Sibte Raza Abidi

A Framework To Build A Causal Knowledge Graph for Chronic Diseases and Cancers By Discovering Semantic Associations from Biomedical Literature Proceedings Article

In: 2021 IEEE International Conference on Healthcare Informatics (ICHI), Victoria, BC, Canada, IEEE, 2021, ISBN: 978-1-6654-0132-6.

Links | BibTeX | Tags: Causal relations, Chronic Illness, Knowledge Graphs

William Van Woensel; Syed Sibte Raza Abidi; Samina Raza Abidi

Decision support for comorbid conditions via execution-time integration of clinical guidelines using transaction-based semantics and temporal planning Journal Article

In: Artificial Intelligence in Medicine, vol. 118, pp. 102127, 2021, ISSN: 0933-3657.

Abstract | Links | BibTeX | Tags: Clinical guidelines, Comorbidity, Decision Support Systems

William Van Woensel; Manal Elnenaei; Syed Ali Imran; Syed Sibte Raza Abidi

Semantic Web Framework to Computerize Staged Reflex Testing Protocols to Mitigate Underutilization of Pathology Tests for Diagnosing Pituitary Disorders Proceedings Article

In: International Conference on Artificial Intelligence in Medicine (AIME), 2021.

BibTeX | Tags: Clinical Decision Support Systems, Reflex Protocols, Semantic Web

Syed Asil Ali Naqvi; Karthik Tennankore; Amanda Vinson; Syed Sibte Raza Abidi

Analyzing Association Rules for Graft Failure Following Deceased and Live Donor Kidney Transplantation Proceedings Article

In: 31st Medical Informatics Europe (MIE2021), 2021.

BibTeX | Tags: Association Rules, Machine Learning

Jaber Rad; Jason Quinn; Calvino Cheng; Robert Liwski; Samina Raza Abidi; Syed Sibte Raza Abidi

Using Interactive Visual Analytics to Optimize in Real-Time Blood Products Inventory at a Blood Bank Proceedings Article

In: 31st Medical Informatics Europe (MIE2021), 2021.

BibTeX | Tags: Blood Inventory Management, Clinical Decision Support Systems, Visual analytics

Ali Daowd; Michael Barrett; Samina Raza Abidi; Syed Sibte Raza Abidi

Building a Knowledge Graph Representing Causal Associations between Risk Factors and Incidence of Breast Cancer Proceedings Article

In: 31st Medical Informatics Europe (MIE2021), 2021.

BibTeX | Tags: Knowledge Graphs, Risk Factors

William Van Woensel; Chad Armstrong; Malavan Rajaratnam; Vaibhav Gupta; Syed Sibte Raza Abidi

Using Knowledge Graphs to Plausibly Infer Missing Associations in EMR Data Proceedings Article

In: 31st Medical Informatics Europe (MIE2021), pp. 417-421, 2021.

Links | BibTeX | Tags: Clinical Decision Support Systems, Knowledge Graphs, Plausible reasoning, Semantic Similarity

Aditi Nair; Syed Sibte Raza Abidi; William Van Woensel; Samina Raza Abidi

Ontology-based Personalized Cognitive Behavioural Plans for Patients with Mild Depression Proceedings Article

In: 31st Medical Informatics Europe (MIE2021), pp. 729-733, 2021.

Links | BibTeX | Tags: Behavioural Change Theory, Ontology Engineering

Michael Barrett; Ali Daowd; Samina Raza Abidi; Syed Sibte Raza

A Knowledge Graph of Mechanistic Associations Between COVID-19, Diabetes Mellitus and Kidney Diseases Proceedings Article

In: 31st Medical Informatics Europe (MIE2021), 2021.

BibTeX | Tags: CoVid-19, Knowledge Graphs

2020

Azra Naseem; Kiran Qasim Ali; Audrey Juma; Afroz Sajwani; Basnama Ayaz Khan; Saleem Sayani; Syed Sibte Raza Abidi

Factors enabling and hindering an eLearning programme for nurses and midwives in Afghanistan Journal Article

In: Scholarship of Teaching and Learning in the South, vol. 4, no. 2, pp. 80, 2020, ISSN: 2523-1154.

Abstract | Links | BibTeX | Tags: eLearning, Learning technology

William Van Woensel; Samina Abidi; Borna Jafarpour; Syed Sibte Raza Abidi

A CIG Integration Framework to Provide Decision Support for Comorbid Conditions using Transaction-based Semantics and Temporal Planning Proceedings Article

In: International Conference on Artificial Intelligence in Medicine (AIME 2020), 2020.

Abstract | BibTeX | Tags: Clinical Decision Support Systems, Clinical Practice Guidelines, Comorbidities, Ontology, Semantic Web

Jaber Rad; Calvino Cheng; Jason G Quinn; Samina Abidi; Robert Liwski; Syed Sibte Raza Abidi

An AI-Driven Predictive Modelling Framework to Analyze and Visualize Blood Product Transactional Data for Reducing Blood Products’ Discards Proceedings Article

In: International Conference on Artificial Intelligence in Medicine (AIME 2020), 2020.

Abstract | BibTeX | Tags: Big Data, Blood Inventory Management, Blood product wastage, Data visualization, Machine Learning, Sequence prediction, Visual analytics

283 entries « 1 of 6 »